HPV Target gene Detail Information

> SATB2-AS1 Gene Search Result


Gene Information
Gene Name SATB2-AS1
Gene ID 150538
Gene Full Name SATB2 antisense RNA 1
Gene Alias -
Transcripts ENSG00000225953
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:26490
lncRNASNP2 ID SATB2-AS1
Target gene [SATB2-AS1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5015605 chr2 283 53 9 345 View
5015606 chr2 74 5 0 79 View
5015607 chr2 423 75 57 555 View

Target gene [SATB2-AS1] related to Omics data
Data ID Experiment type Sample number Platform
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE143026 - SATB2-AS1 peak across samples

Peak Plot