HPV Target gene Detail Information

> SCGB1B2P Gene Search Result


Gene Information
Gene Name SCGB1B2P
Gene ID 643719
Gene Full Name secretoglobin family 1B member 2, pseudogene
Gene Alias SCGB4A1P
Virus HPV
Gene Type pseudo
HGNC ID HGNC:20741
Target gene [SCGB1B2P] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5015358 chr19 110 10 108 228 View
5017262 chr19 12 4 0 16 View
5017263 chr19 22 16 4 42 View

Target gene [SCGB1B2P] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE65858 Expression array 270 Illumina HumanHT-12 V4.0 expression beadchip
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - SCGB1B2P peak across samples

Peak Plot

> Dataset: GSE143026 - SCGB1B2P peak across samples

Peak Plot