HTLV1 Target gene Detail Information

> SEMA5A Gene Search Result


Gene Information
Gene Name SEMA5A
Gene ID 9037
Gene Full Name semaphorin 5A
Gene Alias SEMAF|semF
Transcripts ENSG00000112902
Virus HTLV1
Gene Type protein-coding
HPA Location Info
Membrane Info Human disease related genes, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q13591
HGNC ID HGNC:10736
OMIM ID 609297
Summary This gene belongs to the semaphorin gene family that encodes membrane proteins containing a semaphorin domain and several thrombospondin type-1 repeats. Members of this family are involved in axonal guidance during neural development. This gene has been implicated as an autism susceptibility gene.[provided by RefSeq, Jan 2010]
Target gene [SEMA5A] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6003043 chr5 114 30 43 187 View
6005929 chr5 3 36 39 78 View
6008580 chr5 40 4 0 44 View
6012071 chr5 24 0 0 24 View
6012823 chr5 20 1 0 21 View
6016937 chr5 11 0 0 11 View
6016962 chr5 0 7 4 11 View
6033202 chr5 0 0 0 0 View

Target gene [SEMA5A] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE19080 Expression array 38 Homo sapiens 3K Immunoarray2 HTLV-1 JH
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - SEMA5A peak across samples

Peak Plot