HTLV1 Target gene Detail Information

> SH3KBP1 Gene Search Result


Gene Information
Gene Name SH3KBP1
Gene ID 30011
Gene Full Name SH3 domain containing kinase binding protein 1
Gene Alias AGMX2|CD2BP3|CIN85|GIG10|HSB-1|HSB1|IMD61|MIG18
Transcripts ENSG00000147010
Virus HTLV1
Gene Type protein-coding
HPA Location Info Cytosol;
Membrane Info Disease related genes, Human disease related genes, Predicted intracellular proteins
Uniport_ID Q96B97
HGNC ID HGNC:13867
OMIM ID 300374
Summary This gene encodes an adapter protein that contains one or more N-terminal Src homology domains, a proline rich region and a C-terminal coiled-coil domain. The encoded protein facilitates protein-protein interactions and has been implicated in numerous cellular processes including apoptosis, cytoskeletal rearrangement, cell adhesion and in the regulation of clathrin-dependent endocytosis. Alternate splicing results in multiple transcript variants encoding distinct isoforms. [provided by RefSeq, Jul 2017]
Target gene [SH3KBP1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6002564 chrX 83 25 121 229 View
6008988 chrX 33 5 2 40 View
6014454 chrX 11 5 0 16 View
6015640 chrX 5 2 7 14 View
6015987 chrX 4 2 7 13 View
6019727 chrX 7 0 0 7 View

Target gene [SH3KBP1] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE19080 Expression array 38 Homo sapiens 3K Immunoarray2 HTLV-1 JH
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - SH3KBP1 peak across samples

Peak Plot