HPV Target gene Detail Information

> SPATA31D5P Gene Search Result


Gene Information
Gene Name SPATA31D5P
Gene ID 347127
Gene Full Name SPATA31 subfamily D member 5, pseudogene
Gene Alias FAM75D5|FAM75D5P
Transcripts ENSG00000291172
Virus HPV
Gene Type pseudo
HGNC ID HGNC:38602
Target gene [SPATA31D5P] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5017871 chr9 11 15 2 28 View
5017873 chr9 114 106 16 236 View
5017874 chr9 91 38 16 145 View
5017875 chr9 4 0 0 4 View
5017877 chr9 17 11 23 51 View

Target gene [SPATA31D5P] related to Omics data
Data ID Experiment type Sample number Platform
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE143026 - SPATA31D5P peak across samples

Peak Plot