HTLV1 Target gene Detail Information

> SUCLG2 Gene Search Result


Gene Information
Gene Name SUCLG2
Gene ID 8801
Gene Full Name succinate-CoA ligase GDP-forming subunit beta
Gene Alias G-SCS|GBETA|GTPSCS
Transcripts ENSG00000172340
Virus HTLV1
Gene Type protein-coding
HPA Location Info Mitochondria;Plasma membrane;
Membrane Info Citric acid cycle related proteins, Enzymes, Metabolic proteins, Plasma proteins, Predicted intracellular proteins
Uniport_ID Q96I99
HGNC ID HGNC:11450
OMIM ID 603922
Summary This gene encodes a GTP-specific beta subunit of succinyl-CoA synthetase. Succinyl-CoA synthetase catalyzes the reversible reaction involving the formation of succinyl-CoA and succinate. Alternate splicing results in multiple transcript variants. Pseudogenes of this gene are found on chromosomes 5 and 12. [provided by RefSeq, Apr 2010]
Target gene [SUCLG2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6001366 chr3 76 375 12 463 View
6010948 chr3 28 0 0 28 View
6017032 chr3 11 0 0 11 View
6018470 chr3 2 5 2 9 View
6018762 chr3 5 4 0 9 View
6025709 chr3 1 0 2 3 View

Target gene [SUCLG2] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE19080 Expression array 38 Homo sapiens 3K Immunoarray2 HTLV-1 JH
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - SUCLG2 peak across samples

Peak Plot