HPV Target gene Detail Information

> TEX41 Gene Search Result


Gene Information
Gene Name TEX41
Gene ID 401014
Gene Full Name testis expressed 41
Gene Alias DKFZp686O1327|LINC00953
Transcripts ENSG00000226674
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:48667
lncRNASNP2 ID TEX41
Target gene [TEX41] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5005082 chr2 0 2 0 2 View
5005994 chr2 28 5 0 33 View
5006117 chr2 2 0 0 2 View
5009924 chr2 1 6 0 7 View
5010693 chr2 23 24 51 98 View
5011220 chr2 0 0 0 0 View
5015560 chr2 10 1 0 11 View
5015561 chr2 130 11 1 142 View

Target gene [TEX41] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048
Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE65858 Expression array 270 Illumina HumanHT-12 V4.0 expression beadchip
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE164690 scRNA-seq 51 Illumina NextSeq 500 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
C
  GSE143026
ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
E
  TCGA_CESC
DNA methylation sequencing;RNA-seq 288 TCGA
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: TCGA_CESC - TEX41 expression across samples

Volcano Plot


Bar Plot