HTLV1 Target gene Detail Information

> TGFBR3 Gene Search Result


Gene Information
Gene Name TGFBR3
Gene ID 7049
Gene Full Name transforming growth factor beta receptor 3
Gene Alias BGCAN|betaglycan
Transcripts ENSG00000069702
Virus HTLV1
Gene Type protein-coding
HPA Location Info Cytosol;Secreted to blood;
Membrane Info Cancer-related genes, Plasma proteins, Predicted membrane proteins, Predicted secreted proteins
Uniport_ID Q03167
HGNC ID HGNC:11774
OMIM ID 600742
Summary This locus encodes the transforming growth factor (TGF)-beta type III receptor. The encoded receptor is a membrane proteoglycan that often functions as a co-receptor with other TGF-beta receptor superfamily members. Ectodomain shedding produces soluble TGFBR3, which may inhibit TGFB signaling. Decreased expression of this receptor has been observed in various cancers. Alternatively spliced transcript variants encoding different isoforms have been identified for this gene.[provided by RefSeq, Sep 2010]
Target gene [TGFBR3] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6012190 chr1 20 3 0 23 View
6016981 chr1 10 1 0 11 View
6018598 chr1 1 8 0 9 View

Target gene [TGFBR3] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE19080 Expression array 38 Homo sapiens 3K Immunoarray2 HTLV-1 JH
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - TGFBR3 peak across samples

Peak Plot