HTLV1 Target gene Detail Information

> TRPM3 Gene Search Result


Gene Information
Gene Name TRPM3
Gene ID 80036
Gene Full Name transient receptor potential cation channel subfamily M member 3
Gene Alias CTRCT50|GON-2|LTRPC3|MLSN2|NEDFSS
Transcripts ENSG00000083067
Virus HTLV1
Gene Type protein-coding
HPA Location Info Vesicles;
Membrane Info Predicted intracellular proteins, Predicted membrane proteins, Transporters, Voltage-gated ion channels
Uniport_ID Q9HCF6
HGNC ID HGNC:17992
OMIM ID 608961
Summary The product of this gene belongs to the family of transient receptor potential (TRP) channels. TRP channels are cation-selective channels important for cellular calcium signaling and homeostasis. The protein encoded by this gene mediates calcium entry, and this entry is potentiated by calcium store depletion. Alternatively spliced transcript variants encoding different isoforms have been identified. [provided by RefSeq, Jul 2008]
Target gene [TRPM3] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6011309 chr9 4 10 13 27 View
6011978 chr9 24 0 0 24 View
6014029 chr9 12 5 0 17 View
6018309 chr9 9 0 0 9 View
6019768 chr9 5 2 0 7 View
6020609 chr9 5 1 0 6 View
6021601 chr9 6 0 0 6 View
6024403 chr9 1 2 0 3 View
6026167 chr9 2 0 0 2 View
6031254 chr9 0 0 0 0 View

Target gene [TRPM3] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
E
  GSE19080 		Expression array 38 Homo sapiens 3K Immunoarray2 HTLV-1 JH
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE19080 - TRPM3 expression across samples

Volcano Plot

Bar Plot