HTLV1 Target gene Detail Information

> TSC22D1 Gene Search Result


Gene Information
Gene Name TSC22D1
Gene ID 8848
Gene Full Name TSC22 domain family member 1
Gene Alias HUCEP-2|Ptg-2|TGFB1I4|TSC22
Transcripts ENSG00000102804
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoplasm, Nuclear bodies;
Membrane Info Predicted intracellular proteins, Transcription factors
Uniport_ID Q15714
HGNC ID HGNC:16826
OMIM ID 607715
Summary This gene encodes a member of the TSC22 domain family of leucine zipper transcription factors. The encoded protein is stimulated by transforming growth factor beta, and regulates the transcription of multiple genes including C-type natriuretic peptide. The encoded protein may play a critical role in tumor suppression through the induction of cancer cell apoptosis, and a single nucleotide polymorphism in the promoter of this gene has been associated with diabetic nephropathy. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Aug 2011]
Target gene [TSC22D1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6003016 chr13 31 149 10 190 View
6023097 chr13 3 1 0 4 View
6025768 chr13 3 0 0 3 View
6030674 chr13 0 0 0 0 View

Target gene [TSC22D1] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
E
  GSE19080 		Expression array 38 Homo sapiens 3K Immunoarray2 HTLV-1 JH
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE19080 - TSC22D1 expression across samples

Volcano Plot

Bar Plot