HTLV1 Target gene Detail Information

> ZMYM2 Gene Search Result


Gene Information
Gene Name ZMYM2
Gene ID 7750
Gene Full Name zinc finger MYM-type containing 2
Gene Alias FIM|MYM|NECRC|RAMP|SCLL|ZNF198
Transcripts ENSG00000121741
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoplasm, Endoplasmic reticulum;
Membrane Info Cancer-related genes, Disease related genes, Human disease related genes, Predicted intracellular proteins
Uniport_ID Q9UBW7
HGNC ID HGNC:12989
OMIM ID 602221
Summary The protein encoded by this gene is a zinc finger protein that may act as a transcription factor. The encoded protein may be part of a BHC histone deacetylase complex. Translocation of this gene with the fibroblast growth factor receptor-1 gene (FGFR1) results in a fusion gene, which may be a cause of stem cell leukemia lymphoma syndrome (SCLL). Several transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Jul 2010]
Target gene [ZMYM2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6001360 chr13 441 12 13 466 View
6010458 chr13 6 3 22 31 View
6011564 chr13 25 1 0 26 View
6014318 chr13 13 4 0 17 View
6022004 chr13 4 1 0 5 View
6025075 chr13 3 0 0 3 View

Target gene [ZMYM2] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE19080 Expression array 38 Homo sapiens 3K Immunoarray2 HTLV-1 JH
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - ZMYM2 peak across samples

Peak Plot