EBV Target gene Detail Information

> BLOC1S5-TXNDC5 Gene Search Result


Gene Information
Gene Name BLOC1S5-TXNDC5
Gene ID 100526836
Gene Full Name BLOC1S5-TXNDC5 readthrough (NMD candidate)
Gene Alias MUTED-TXNDC5
Transcripts ENSG00000259040
Virus EBV
Gene Type ncRNA
HGNC ID HGNC:42001
Summary This locus represents naturally occurring read-through transcription between the neighboring MUTED (muted homolog) and TXNDC5 (thioredoxin domain containing 5) genes on chromosome 6. The read-through transcript is a candidate for nonsense-mediated mRNA decay (NMD) and is unlikely to produce a protein product. [provided by RefSeq, Dec 2010]
Target gene [BLOC1S5-TXNDC5] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
3000124 chr6 15 101 18 134 View

Target gene [BLOC1S5-TXNDC5] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE246060
Chip-seq 26 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE198334
Chip-seq 4 Illumina NextSeq 500 (Homo sapiens)
GSE100458 Expression array 14 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array [CDF: Brainarray HGU133Plus2_Hs_ENTREZG_v21]
C
  GSE246059
ATAC-seq 8 Illumina NextSeq 500 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE177046 RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE225248
Chip-seq 12 Illumina NextSeq 500 (Homo sapiens)
GSE102203 Expression array 10 [HuGene-2_0-st] Affymetrix Human Gene 2.0 ST Array [probe set (exon) version]
GSE85599 Expression array 17 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE246060 - BLOC1S5-TXNDC5 peak across samples

Peak Plot


> Dataset: GSE198334 - BLOC1S5-TXNDC5 peak across samples

Peak Plot


> Dataset: GSE246059 - BLOC1S5-TXNDC5 peak across samples

Peak Plot


> Dataset: GSE225248 - BLOC1S5-TXNDC5 peak across samples

Peak Plot