Accession	GSE225248
Status	2024/3/27
Title	Enhancer infestation drives tumorigenic activation of inactive compartment in Epstein-Barr virus-positive nasopharyngeal carcinoma [ChIP-Seq]
Organism	Homo sapiens
Experiment type	Genome binding/occupancy profiling by high throughput sequencing
Summary	We analyzed active enhancers of nasopharyngeal epithelial cell lines and nasopharyngeal carcinoma cell lines by performing ChIP-seq on H3K4me1, H3K4me3, and H3K27ac.
Samples	GSM ID Sample info Characteristics Description GSM7042514 NP69T_H3K4me1 cell type:nasopharyngeal epithelial cell lines; chip antibody:H3K4me1_ChIP (CST, 5326S) - GSM7042515 NP69T_H3K4me3 cell type:nasopharyngeal epithelial cell lines; chip antibody:H3K4me3_ChIP (Active Motif, 39159) - GSM7042516 NP69T_H3K27ac cell type:nasopharyngeal epithelial cell lines; chip antibody:H3K27ac_ChIP (Active Motif, 91193) - GSM7042517 C666-1_H3K4me1 cell type:EBV(+) nasopharyngeal carcinoma cell lines; chip antibody:H3K4me1_ChIP (CST, 5326S) - GSM7042518 C666-1_H3K4me3 cell type:EBV(+) nasopharyngeal carcinoma cell lines; chip antibody:H3K4me3_ChIP (Active Motif, 39159) - GSM7042519 C666-1_H3K27ac cell type:EBV(+) nasopharyngeal carcinoma cell lines; chip antibody:H3K27ac_ChIP (Active Motif, 91193) - GSM7042520 NPC-TW01_H3K4me1 cell type:EBV(-) nasopharyngeal carcinoma cell lines; chip antibody:H3K4me1_ChIP (CST, 5326S) - GSM7042521 NPC-TW01_H3K4me3 cell type:EBV(-) nasopharyngeal carcinoma cell lines; chip antibody:H3K4me3_ChIP (Active Motif, 39159) - GSM7042522 NPC-TW01_H3K27ac cell type:EBV(-) nasopharyngeal carcinoma cell lines; chip antibody:H3K27ac_ChIP (Active Motif, 91193) - GSM7042523 NPC-TW01-EBV-eGFP_H3K4me1 cell type:EBV infected nasopharyngeal carcinoma cell lines; chip antibody:H3K4me1_ChIP (CST, 5326S) - GSM7042524 NPC-TW01-EBV-eGFP_H3K4me3 cell type:EBV infected nasopharyngeal carcinoma cell lines; chip antibody:H3K4me3_ChIP (Active Motif, 39159) - GSM7042525 NPC-TW01-EBV-eGFP_H3K27ac cell type:EBV infected nasopharyngeal carcinoma cell lines; chip antibody:H3K27ac_ChIP (Active Motif, 91193) -
Platform	GPL18573  : Illumina NextSeq 500 (Homo sapiens)
Literature	38490101
Download	Download Genome Binding/Occupancy Profiling Analysis Data