HPV Target gene Detail Information

> C5orf46 Gene Search Result


Gene Information
Gene Name C5orf46
Gene ID 389336
Gene Full Name chromosome 5 open reading frame 46
Gene Alias AP-64|SSSP1
Transcripts ENSG00000178776
Virus HPV
Gene Type protein-coding
HPA Location Info Nuclear speckles;Mitochondria;Secreted in other tissues;
Membrane Info Predicted secreted proteins
Uniport_ID Q6UWT4
HGNC ID HGNC:33768
Summary Located in extracellular exosome. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [C5orf46] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5013617 chr5 236 21 26 283 View
5013618 chr5 86 68 135 289 View
5013619 chr5 84 68 135 287 View
5013620 chr5 81 69 135 285 View
5013621 chr5 48 42 114 204 View
5013622 chr5 382 198 92 672 View

Target gene [C5orf46] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE65858 Expression array 270 Illumina HumanHT-12 V4.0 expression beadchip
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE164690 scRNA-seq 51 Illumina NextSeq 500 (Homo sapiens)
GSE138080 Expression array 35 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE55542 Expression array 36 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip
GSE55550 Expression array 155 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - C5orf46 peak across samples

Peak Plot

> Dataset: GSE143026 - C5orf46 peak across samples

Peak Plot