HPV Target gene Detail Information

> CA10 Gene Search Result


Gene Information
Gene Name CA10
Gene ID 56934
Gene Full Name carbonic anhydrase 10
Gene Alias CA-RPX|CARPX|HUCEP-15
Transcripts ENSG00000154975
Virus HPV
Gene Type protein-coding
HPA Location Info Vesicles;Secreted in brain;
Membrane Info Predicted intracellular proteins, Predicted secreted proteins
Uniport_ID Q9NS85
HGNC ID HGNC:1369
OMIM ID 604642
Summary This gene encodes a protein that belongs to the carbonic anhydrase family of zinc metalloenzymes, which catalyze the reversible hydration of carbon dioxide in various biological processes. The protein encoded by this gene is an acatalytic member of the alpha-carbonic anhydrase subgroup, and it is thought to play a role in the central nervous system, especially in brain development. Multiple transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Jul 2008]
Target gene [CA10] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5003333 chr17 3 1 0 4 View
5007518 chr17 5 0 0 5 View
5007519 chr17 0 4 0 4 View
5007520 chr17 8 0 0 8 View
5007521 chr17 10 1 3 14 View
5008463 chr17 0 2 0 2 View
5012964 chr17 3 1 2 6 View
5012965 chr17 3 1 2 6 View
5012966 chr17 15 18 1 34 View
5015233 chr17 5 0 3 8 View
5015234 chr17 0 4 0 4 View
5015235 chr17 2 14 2 18 View
5015236 chr17 21 1 5 27 View
5015237 chr17 8 17 9 34 View

Target gene [CA10] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048
Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE65858 Expression array 270 Illumina HumanHT-12 V4.0 expression beadchip
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE55542 Expression array 36 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
C
  GSE143026
ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
M
  TCGA_CESC
DNA methylation sequencing;RNA-seq 288 TCGA
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip
GSE55550 Expression array 155 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE183048 - CA10 peak across samples

Peak Plot


> Dataset: GSE143026 - CA10 peak across samples

Peak Plot