HPV Target gene Detail Information

> CCDC148 Gene Search Result


Gene Information
Gene Name CCDC148
Gene ID 130940
Gene Full Name coiled-coil domain containing 148
Gene Alias -
Transcripts ENSG00000153237
Virus HPV
Gene Type protein-coding
HPA Location Info Nucleoplasm, Nucleoli, Nucleoli rim;
Membrane Info Predicted intracellular proteins
Uniport_ID Q8NFR7
HGNC ID HGNC:25191
Target gene [CCDC148] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5002809 chr2 6 1 0 7 View
5002858 chr2 6 1 0 7 View
5002872 chr2 6 1 0 7 View
5002928 chr2 5 1 0 6 View
5002995 chr2 5 1 0 6 View
5003014 chr2 5 1 0 6 View
5010141 chr2 7742 7128 2118 16988 View
5010143 chr2 6 1 0 7 View
5010157 chr2 6 1 0 7 View
5015571 chr2 35 1 0 36 View

Target gene [CCDC148] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE65858 Expression array 270 Illumina HumanHT-12 V4.0 expression beadchip
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE55542 Expression array 36 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip
GSE55550 Expression array 155 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - CCDC148 peak across samples

Peak Plot

> Dataset: GSE143026 - CCDC148 peak across samples

Peak Plot