MCV Target gene Detail Information

> CDKAL1 Gene Search Result


Gene Information
Gene Name CDKAL1
Gene ID 54901
Gene Full Name CDKAL1 threonylcarbamoyladenosine tRNA methylthiotransferase
Gene Alias -
Transcripts ENSG00000145996
Virus MCV
Gene Type protein-coding
HPA Location Info
Membrane Info Disease related genes, Enzymes, Human disease related genes, Potential drug targets, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q5VV42
HGNC ID HGNC:21050
OMIM ID 611259
Summary The protein encoded by this gene is a member of the methylthiotransferase family. The function of this gene is not known. Genome-wide association studies have linked single nucleotide polymorphisms in an intron of this gene with susceptibilty to type 2 diabetes. [provided by RefSeq, May 2010]
Target gene [CDKAL1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
7000014 chr6 17 4 1 22 View
7000022 chr6 1865 2200 913 4978 View

Target gene [CDKAL1] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE147406
Chip-seq 39 Illumina NextSeq 500 (Homo sapiens)
C
  GSE124856
Chip-seq 8 Illumina NextSeq 500 (Homo sapiens)
GSE136867 scRNA-seq 2 Illumina NextSeq 500 (Homo sapiens)
GSE226438 scRNA-seq 11 Illumina NovaSeq 6000 (Homo sapiens)
GSE117988 scRNA-seq 6 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE69877
Chip-seq 10 Illumina HiSeq 2000 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens)
C
  GSE230758
Chip-seq 20 Illumina HiSeq 2500 (Homo sapiens)
GSE118056 scRNA-seq 4 Illumina NovaSeq 6000 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE147406 - CDKAL1 peak across samples

Peak Plot


> Dataset: GSE124856 - CDKAL1 peak across samples

Peak Plot


> Dataset: GSE69877 - CDKAL1 peak across samples

Peak Plot


> Dataset: GSE230758 - CDKAL1 peak across samples

Peak Plot