HBV Target gene Detail Information

> CENPC Gene Search Result


Gene Information
Gene Name CENPC
Gene ID 1060
Gene Full Name centromere protein C
Gene Alias CENP-C|CENPC1|MIF2|hcp-4
Transcripts ENSG00000145241
Virus HBV
Gene Type protein-coding
HPA Location Info Nuclear bodies, Kinetochore;Nucleoplasm, Midbody;
Membrane Info Predicted intracellular proteins
Uniport_ID Q03188
HGNC ID HGNC:1854
OMIM ID 117141
Summary Centromere protein C 1 is a centromere autoantigen and a component of the inner kinetochore plate. The protein is required for maintaining proper kinetochore size and a timely transition to anaphase. A putative pseudogene exists on chromosome 12. [provided by RefSeq, Jul 2008]
Target gene [CENPC] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1012500 chr4 4 2 0 6 View
1014487 chr4 1 2 0 3 View
1021037 chr4 4 2 0 6 View
1021038 chr4 1 2 0 3 View
1041391 chr4 9 45 11 65 View
1042853 chr4 4 3 0 7 View
1042854 chr4 11 3 0 14 View

Target gene [CENPC] related to Omics data
Data ID Experiment type Sample number Platform
GSE252863 scRNA-seq 10 Illumina HiSeq 2500 (Homo sapiens)
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
GSE199850 scRNA-seq 1 HiSeq X Ten (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
GSE247322 scRNA-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE64877 		Chip-seq 2 Illumina Genome Analyzer (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - CENPC peak across samples

Peak Plot

> Dataset: GSE68402 - CENPC peak across samples

Peak Plot

> Dataset: GSE270130 - CENPC peak across samples

Peak Plot

> Dataset: GSE64877 - CENPC peak across samples

Peak Plot

> Dataset: GSE131257 - CENPC peak across samples

Peak Plot