HPV Target gene Detail Information

> CFAP47 Gene Search Result


Gene Information
Gene Name CFAP47
Gene ID 286464
Gene Full Name cilia and flagella associated protein 47
Gene Alias CHDC2|CXorf22|CXorf30|CXorf59|SPGF52|SPGFX3
Transcripts ENSG00000165164
Virus HPV
Gene Type protein-coding
HPA Location Info
Membrane Info Disease related genes, Human disease related genes, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q6ZTR5
HGNC ID HGNC:26708
OMIM ID 301057
Summary While this gene is well-supported by transcript data, no functional information on its protein product is currently available. [provided by RefSeq, Dec 2009]
Target gene [CFAP47] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5008087 chrX 0 0 0 0 View
5009087 chrX 0 0 0 0 View

Target gene [CFAP47] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - CFAP47 peak across samples

Peak Plot

> Dataset: GSE143026 - CFAP47 peak across samples

Peak Plot