HPV Target gene Detail Information

> CNBD1 Gene Search Result


Gene Information
Gene Name CNBD1
Gene ID 168975
Gene Full Name cyclic nucleotide binding domain containing 1
Gene Alias -
Transcripts ENSG00000176571
Virus HPV
Gene Type protein-coding
HPA Location Info
Membrane Info Cancer-related genes, Predicted intracellular proteins
Uniport_ID Q8NA66
HGNC ID HGNC:26663
Target gene [CNBD1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5000513 chr8 94 56 3 153 View
5006200 chr8 3 3 0 6 View
5016342 chr8 93 40 3 136 View
5017787 chr8 9 0 0 9 View

Target gene [CNBD1] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE55542 Expression array 36 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip
GSE55550 Expression array 155 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - CNBD1 peak across samples

Peak Plot

> Dataset: GSE143026 - CNBD1 peak across samples

Peak Plot