Gene Information
|
Gene Name
|
CNTNAP5 |
|
Gene ID
|
129684
|
|
Gene Full Name
|
contactin associated protein family member 5 |
|
Gene Alias
|
caspr5 |
|
Transcripts
|
ENSG00000155052
|
|
Virus
|
HPV |
|
Gene Type
|
protein-coding |
|
HPA Location Info
|
Nucleoli fibrillar center;Nucleoplasm, Vesicles; 
|
|
Membrane Info
|
Predicted membrane proteins |
|
Uniport_ID
|
Q8WYK1
|
|
HGNC ID
|
HGNC:18748
|
|
OMIM ID
|
610519 |
|
Summary
|
This gene product belongs to the neurexin family, members of which function in the vertebrate nervous system as cell adhesion molecules and receptors. This protein, like other neurexin proteins, contains epidermal growth factor repeats and laminin G domains. In addition, it includes an F5/8 type C domain, discoidin/neuropilin- and fibrinogen-like domains, and thrombospondin N-terminal-like domains. [provided by RefSeq, Jul 2008] |
Target gene [CNTNAP5] related to VISs 
Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section
| DVID |
Chromosome |
HM |
TFBS |
CA |
Sum of Overlapped Records |
Detail |
| 5001489 |
chr2 |
17 |
10 |
4 |
31 |
View |
| 5004279 |
chr2 |
0 |
0 |
0 |
0 |
View |
| 5006415 |
chr2 |
2 |
0 |
0 |
2 |
View |
| 5007466 |
chr2 |
12 |
4 |
0 |
16 |
View |
| 5009968 |
chr2 |
6 |
3 |
1 |
10 |
View |
| 5009980 |
chr2 |
0 |
0 |
0 |
0 |
View |
| 5011301 |
chr2 |
8 |
0 |
0 |
8 |
View |
| 5015519 |
chr2 |
0 |
0 |
0 |
0 |
View |
| 5017386 |
chr2 |
1 |
3 |
0 |
4 |
View |
| 5017387 |
chr2 |
1 |
3 |
0 |
4 |
View |
| 5017388 |
chr2 |
1 |
3 |
0 |
4 |
View |
Target gene [CNTNAP5] related to Omics data
| Data ID |
Experiment type |
Sample number |
Platform |
|
GSE169622
|
Methylation profiling (Array) |
9 |
Infinium MethylationEPIC |
|
GSE181805
|
Expression array |
25 |
[HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version] |
|
GSE196215
|
RNA-seq |
8 |
Illumina NovaSeq 6000 (Homo sapiens) |
|
GSE140662
|
Expression array |
8 |
[HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version] |
|
GSE55542
|
Expression array |
36 |
Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version) |
|
C GSE143026
|
ATAC-seq;Chip-seq;RNA-seq |
30 |
Illumina HiSeq 2500 (Homo sapiens) |
|
TCGA_CESC
|
DNA methylation sequencing;RNA-seq |
288 |
TCGA |
|
GSE51993
|
Expression array |
48 |
Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip |
|
GSE55550
|
Expression array |
155 |
Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version) |
|
GSE165883
|
RNA-seq |
20 |
Illumina NextSeq 500 (Homo sapiens) |
When the gene can detect a peak in the dataset, a peak plot will be displayed.
> Dataset: GSE143026 - CNTNAP5 peak across samples
|
Peak Plot
|
|
|
HPV Target gene Detail Information
