HPV Target gene Detail Information

> CSMD1 Gene Search Result


Gene Information
Gene Name CSMD1
Gene ID 64478
Gene Full Name CUB and Sushi multiple domains 1
Gene Alias PPP1R24
Transcripts ENSG00000183117
Virus HPV
Gene Type protein-coding
HPA Location Info Vesicles;
Membrane Info Plasma proteins, Predicted membrane proteins
Uniport_ID Q96PZ7
HGNC ID HGNC:14026
OMIM ID 608397
Summary Predicted to act upstream of or within several processes, including learning or memory; mammary gland branching involved in pregnancy; and reproductive structure development. Predicted to be located in membrane. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [CSMD1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5001504 chr8 26 5 0 31 View
5005903 chr8 0 2 0 2 View
5006772 chr8 0 0 0 0 View
5006773 chr8 4 0 0 4 View
5006774 chr8 2 1 0 3 View
5007731 chr8 39 16 67 122 View
5008436 chr8 17 2 0 19 View
5010145 chr8 57 19 2 78 View
5010158 chr8 72 7 4 83 View
5010159 chr8 55 19 1 75 View
5011299 chr8 56 25 1 82 View
5011729 chr8 9 1 0 10 View
5011933 chr8 0 0 0 0 View
5017769 chr8 3 0 0 3 View
5017770 chr8 0 0 0 0 View

Target gene [CSMD1] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048
Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE65858 Expression array 270 Illumina HumanHT-12 V4.0 expression beadchip
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE55542 Expression array 36 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
C
  GSE143026
ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
M
  TCGA_CESC
DNA methylation sequencing;RNA-seq 288 TCGA
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip
GSE55550 Expression array 155 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE183048 - CSMD1 peak across samples

Peak Plot


> Dataset: GSE143026 - CSMD1 peak across samples

Peak Plot