HPV Target gene Detail Information

> CTAG1B Gene Search Result


Gene Information
Gene Name CTAG1B
Gene ID 1485
Gene Full Name cancer/testis antigen 1B
Gene Alias CT6.1|CTAG|CTAG1|ESO1|LAGE-2|LAGE2B|NY-ESO-1
Transcripts ENSG00000184033
Virus HPV
Gene Type protein-coding
HPA Location Info Golgi apparatus, Vesicles;
Membrane Info Cancer-related genes, Predicted intracellular proteins
Uniport_ID P78358
HGNC ID HGNC:2491
OMIM ID 300156
Summary The protein encoded by this gene is an antigen that is overexpressed in many cancers but that is also expressed in normal testis. This gene is found in a duplicated region of the X-chromosome and therefore has a neighboring gene of identical sequence. [provided by RefSeq, Jan 2012]
Target gene [CTAG1B] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5013946 chrX 0 0 0 0 View
5013947 chrX 0 0 0 0 View
5013948 chrX 0 0 0 0 View
5013949 chrX 0 0 0 0 View
5013950 chrX 0 0 0 0 View

Target gene [CTAG1B] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE65858 Expression array 270 Illumina HumanHT-12 V4.0 expression beadchip
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip
GSE199029 Variation;RNA-seq 44 NanoString Human nCounter PanCancer IO360 Panel


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - CTAG1B peak across samples

Peak Plot

> Dataset: GSE143026 - CTAG1B peak across samples

Peak Plot