HPV Target gene Detail Information

> EEFSEC Gene Search Result


Gene Information
Gene Name EEFSEC
Gene ID 60678
Gene Full Name eukaryotic elongation factor, selenocysteine-tRNA specific
Gene Alias EFSEC|NEDPSB|SELB
Transcripts ENSG00000132394
Virus HPV
Gene Type protein-coding
HPA Location Info Nucleoplasm, Nuclear bodies;Cytosol;
Membrane Info Predicted intracellular proteins
Uniport_ID P57772
HGNC ID HGNC:24614
OMIM ID 607695
Summary Enables GTPase activity. Involved in selenocysteine incorporation. Predicted to be located in cytoplasm and nucleus. Predicted to be part of ribonucleoprotein complex. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [EEFSEC] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5005802 chr3 6 1 3 10 View
5006997 chr3 9 0 0 9 View
5013431 chr3 62 2 5 69 View
5013432 chr3 62 3 7 72 View
5013433 chr3 48 12 0 60 View
5013434 chr3 42 12 2 56 View
5013435 chr3 16 10 4 30 View
5015843 chr3 6 1 0 7 View
5015844 chr3 6 18 0 24 View
5015845 chr3 45 7 1 53 View
5015846 chr3 249 186 45 480 View

Target gene [EEFSEC] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE65858 Expression array 270 Illumina HumanHT-12 V4.0 expression beadchip
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE55542 Expression array 36 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip
GSE55550 Expression array 155 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - EEFSEC peak across samples

Peak Plot

> Dataset: GSE143026 - EEFSEC peak across samples

Peak Plot