HPV Target gene Detail Information

> EMBP1 Gene Search Result


Gene Information
Gene Name EMBP1
Gene ID 647121
Gene Full Name embigin pseudogene 1
Gene Alias -
Transcripts ENSG00000291141
Virus HPV
Gene Type pseudo
HGNC ID HGNC:38661
Target gene [EMBP1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5009732 chr1 135 55 7 197 View
5009741 chr1 157 52 7 216 View
5009760 chr1 146 0 0 146 View
5011595 chr1 290 47 7 344 View
5011596 chr1 448 31 4 483 View
5012028 chr1 437 44 4 485 View
5012112 chr1 423 47 5 475 View
5016952 chr1 47 62 10 119 View

Target gene [EMBP1] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE65858 Expression array 270 Illumina HumanHT-12 V4.0 expression beadchip
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE138080 Expression array 35 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - EMBP1 peak across samples

Peak Plot

> Dataset: GSE143026 - EMBP1 peak across samples

Peak Plot