HPV Target gene Detail Information

> ERC2 Gene Search Result


Gene Information
Gene Name ERC2
Gene ID 26059
Gene Full Name ELKS/RAB6-interacting/CAST family member 2
Gene Alias CAST|CAST1|ELKSL|SPBC110|Spc110
Transcripts ENSG00000187672
Virus HPV
Gene Type protein-coding
HPA Location Info
Membrane Info Plasma proteins, Predicted intracellular proteins
Uniport_ID O15083
HGNC ID HGNC:31922
OMIM ID 617250
Summary This gene encodes a protein that belongs to the Rab3-interacting molecule (RIM)-binding protein family. Members of this protein family form part of the cytomatrix at the active zone (CAZ) complex and function as regulators of neurotransmitter release. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Nov 2015]
Target gene [ERC2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5001640 chr3 8 8 10 26 View
5001643 chr3 11 7 8 26 View
5004235 chr3 1 0 0 1 View
5004777 chr3 16 6 3 25 View
5005578 chr3 1 0 0 1 View
5006789 chr3 1 2 1 4 View
5006790 chr3 6 0 0 6 View
5006791 chr3 15 8 6 29 View
5006792 chr3 0 1 0 1 View
5006793 chr3 0 1 1 2 View
5008147 chr3 4 2 2 8 View
5015784 chr3 49 2 0 51 View
5015785 chr3 28 3 16 47 View

Target gene [ERC2] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048
Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE65858 Expression array 270 Illumina HumanHT-12 V4.0 expression beadchip
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE55542 Expression array 36 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
C
  GSE143026
ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
E
  TCGA_CESC
DNA methylation sequencing;RNA-seq 288 TCGA
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip
GSE55550 Expression array 155 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: TCGA_CESC - ERC2 expression across samples

Volcano Plot


Bar Plot