HPV Target gene Detail Information

> ESR2 Gene Search Result


Gene Information
Gene Name ESR2
Gene ID 2100
Gene Full Name estrogen receptor 2
Gene Alias ER-BETA|ESR-BETA|ESRB|ESTRB|Erb|NR3A2|ODG8
Transcripts ENSG00000140009
Virus HPV
Gene Type protein-coding
HPA Location Info Nucleoplasm;Vesicles;
Membrane Info Cancer-related genes, Disease related genes, FDA approved drug targets, Human disease related genes, Nuclear receptors, Predicted intracellular proteins, Transcription factors
Uniport_ID Q92731
HGNC ID HGNC:3468
OMIM ID 601663
Summary This gene encodes a member of the family of estrogen receptors and superfamily of nuclear receptor transcription factors. The gene product contains an N-terminal DNA binding domain and C-terminal ligand binding domain and is localized to the nucleus, cytoplasm, and mitochondria. Upon binding to 17beta-estradiol or related ligands, the encoded protein forms homo- or hetero-dimers that interact with specific DNA sequences to activate transcription. Some isoforms dominantly inhibit the activity of other estrogen receptor family members. Several alternatively spliced transcript variants of this gene have been described, but the full-length nature of some of these variants has not been fully characterized. [provided by RefSeq, Jul 2008]
Target gene [ESR2] related to virus gene/protein/region

Mutation Table: if previous studies reported that target gene was related to virus gene/region/protein, the information in this literature was listed in this section


ID PMID Mutation Gene/Protein/Region Encoding Gene/Protein Disease Description Detail
1 32677948 A7376G
LCR
Squamous Intraepithelial Lesions
Cervical Intraepithelial Neoplasia
G
L
T
View
2 32677948 T7791A
LCR
Squamous Intraepithelial Lesions
Cervical Intraepithelial Neoplasia
G
L
T
View
3 32677948 A7793C
LCR
Squamous Intraepithelial Lesions
Cervical Intraepithelial Neoplasia
G
L
T
View
4 32677948 C7265G
LCR
Squamous Intraepithelial Lesions
Cervical Intraepithelial Neoplasia
G
L
T
View
5 29695285 A7793G
LCR
Papillomavirus Infections
G
R
S
L
T
View

Target gene [ESR2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5015004 chr14 1 16 1 18 View

Target gene [ESR2] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048
Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE65858 Expression array 270 Illumina HumanHT-12 V4.0 expression beadchip
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE55542 Expression array 36 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
C
  GSE143026
ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip
GSE55550 Expression array 155 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - ESR2 peak across samples

Peak Plot


> Dataset: GSE143026 - ESR2 peak across samples

Peak Plot