HPV Target gene Detail Information

> FRMPD4 Gene Search Result


Gene Information
Gene Name FRMPD4
Gene ID 9758
Gene Full Name FERM and PDZ domain containing 4
Gene Alias MRX104|PDZD10|PDZK10|XLID104
Transcripts ENSG00000169933
Virus HPV
Gene Type protein-coding
HPA Location Info
Membrane Info Disease related genes, Human disease related genes, Predicted intracellular proteins
Uniport_ID Q14CM0
HGNC ID HGNC:29007
OMIM ID 300838
Summary This gene encodes a multi-domain (WW, PDZ, FERM) containing protein. Through its interaction with other proteins (such as PSD-95), it functions as a positive regulator of dendritic spine morphogenesis and density, and is required for the maintenance of excitatory synaptic transmission. [provided by RefSeq, Jan 2010]
Target gene [FRMPD4] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5004232 chrX 0 1 0 1 View
5004233 chrX 0 1 0 1 View
5004689 chrX 0 0 0 0 View
5004798 chrX 0 0 0 0 View
5005236 chrX 0 1 0 1 View
5009839 chrX 0 1 0 1 View
5009840 chrX 0 0 0 0 View
5009841 chrX 0 0 0 0 View
5009842 chrX 2 2 1 5 View
5011723 chrX 1 0 0 1 View
5016537 chrX 0 1 0 1 View
5016538 chrX 0 0 0 0 View
5017933 chrX 2 2 1 5 View
5017934 chrX 0 0 0 0 View
5017935 chrX 0 0 0 0 View
5017936 chrX 0 0 0 0 View
5017937 chrX 0 0 0 0 View
5017938 chrX 0 1 0 1 View

Target gene [FRMPD4] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048
Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE65858 Expression array 270 Illumina HumanHT-12 V4.0 expression beadchip
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE55542 Expression array 36 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
C
  GSE143026
ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
M
  TCGA_CESC
DNA methylation sequencing;RNA-seq 288 TCGA
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip
GSE55550 Expression array 155 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE183048 - FRMPD4 peak across samples

Peak Plot


> Dataset: GSE143026 - FRMPD4 peak across samples

Peak Plot