HPV Target gene Detail Information

> KCNH5 Gene Search Result


Gene Information
Gene Name KCNH5
Gene ID 27133
Gene Full Name potassium voltage-gated channel subfamily H member 5
Gene Alias DEE112|EAG2|H-EAG2|Kv10.2|hEAG2
Transcripts ENSG00000140015
Virus HPV
Gene Type protein-coding
HPA Location Info Centrosome;Nucleoplasm, Cytosol;
Membrane Info Predicted membrane proteins, Transporters, Voltage-gated ion channels
Uniport_ID Q8NCM2
HGNC ID HGNC:6254
OMIM ID 605716
Summary This gene encodes a member of voltage-gated potassium channels. Members of this family have diverse functions, including regulating neurotransmitter and hormone release, cardiac function, and cell volume. This protein is an outward-rectifying, noninactivating channel. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jul 2013]
Target gene [KCNH5] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5002475 chr14 8 3 0 11 View
5004100 chr14 0 1 0 1 View
5005054 chr14 0 1 0 1 View
5005615 chr14 41 3 2 46 View
5015003 chr14 1 4 0 5 View

Target gene [KCNH5] related to Omics data
Data ID Experiment type Sample number Platform
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE55542 Expression array 36 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
C
  GSE143026
ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip
GSE55550 Expression array 155 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE143026 - KCNH5 peak across samples

Peak Plot