HPV Target gene Detail Information

> KCNT2 Gene Search Result


Gene Information
Gene Name KCNT2
Gene ID 343450
Gene Full Name potassium sodium-activated channel subfamily T member 2
Gene Alias DEE57|EIEE57|KCa4.2|KNa1.2|SLICK|SLO2.1
Transcripts ENSG00000162687
Virus HPV
Gene Type protein-coding
HPA Location Info Vesicles;
Membrane Info Disease related genes, Human disease related genes, Potential drug targets, Predicted intracellular proteins, Predicted membrane proteins, Transporters, Voltage-gated ion channels
Uniport_ID Q6UVM3
HGNC ID HGNC:18866
OMIM ID 610044
Summary Enables chloride-activated potassium channel activity and intracellular sodium-activated potassium channel activity. Involved in potassium ion export across plasma membrane. Located in plasma membrane. Implicated in developmental and epileptic encephalopathy 57. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [KCNT2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5004370 chr1 0 0 0 0 View
5009331 chr1 0 3 0 3 View
5016974 chr1 0 0 0 0 View
5016975 chr1 2 15 1 18 View
5016976 chr1 0 12 6 18 View
5016977 chr1 5 21 56 82 View
5016978 chr1 0 1 0 1 View
5016979 chr1 5 0 1 6 View
5016980 chr1 5 2 5 12 View
5016981 chr1 1 0 1 2 View
5016982 chr1 1 1 0 2 View
5016983 chr1 2062 220 186 2468 View
5016984 chr1 2226 689 786 3701 View
5016985 chr1 5 0 0 5 View

Target gene [KCNT2] related to Omics data
Data ID Experiment type Sample number Platform
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE65858 Expression array 270 Illumina HumanHT-12 V4.0 expression beadchip
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE55542 Expression array 36 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
C
  GSE143026
ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
E
  TCGA_CESC
DNA methylation sequencing;RNA-seq 288 TCGA
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip
GSE55550 Expression array 155 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: TCGA_CESC - KCNT2 expression across samples

Volcano Plot


Bar Plot