HPV Target gene Detail Information

> LINC00320 Gene Search Result


Gene Information
Gene Name LINC00320
Gene ID 387486
Gene Full Name long intergenic non-protein coding RNA 320
Gene Alias C21orf131|NCRNA00320|PRED14
Transcripts ENSG00000224924
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:19690
lncRNASNP2 ID LINC00320
Target gene [LINC00320] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5001944 chr21 10 9 0 19 View
5001993 chr21 11 7 0 18 View
5004220 chr21 1 0 0 1 View
5010458 chr21 12 0 0 12 View
5011590 chr21 1 0 0 1 View

Target gene [LINC00320] related to Omics data
Data ID Experiment type Sample number Platform
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE55542 Expression array 36 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip
GSE55550 Expression array 155 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE143026 - LINC00320 peak across samples

Peak Plot