HPV Target gene Detail Information

> LINC00632 Gene Search Result


Gene Information
Gene Name LINC00632
Gene ID 286411
Gene Full Name long intergenic non-protein coding RNA 632
Gene Alias ARST|ASINC|BMOR|CDR1-AS|CDR1NAT|CDR1as|MDHDH|ciRS-7
Transcripts ENSG00000203930
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:27865
lncRNASNP2 ID LINC00632
Target gene [LINC00632] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5010706 chrX 0 0 0 0 View
5016607 chrX 40 12 1 53 View

Target gene [LINC00632] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048
Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
C
  GSE143026
ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
E
  TCGA_CESC
DNA methylation sequencing;RNA-seq 288 TCGA
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: TCGA_CESC - LINC00632 expression across samples

Volcano Plot


Bar Plot