Gene Name	LINGO2
Gene ID	158038
Gene Full Name	leucine rich repeat and Ig domain containing 2
Gene Alias	LERN3|LRRN6C
Transcripts	ENSG00000174482
Virus	HPV
Gene Type	protein-coding
HPA Location Info	Cytoplasmic bodies;Nucleoplasm;
Membrane Info	Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID	Q7L985
HGNC ID	HGNC:21207
OMIM ID	609793
Summary	Predicted to act upstream of or within positive regulation of synapse assembly. Predicted to be located in membrane. Predicted to be active in several cellular components, including extracellular space; glutamatergic synapse; and synaptic membrane. [provided by Alliance of Genome Resources, Apr 2025]

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5001574	chr9	8	6	14	28	View
5002474	chr9	3	0	8	11	View
5002859	chr9	5	1	1	7	View
5004796	chr9	1	0	6	7	View
5005029	chr9	137	19	36	192	View
5005670	chr9	0	0	0	0	View
5005757	chr9	0	0	0	0	View
5006574	chr9	0	4	0	4	View
5009029	chr9	0	2	11	13	View
5010590	chr9	10	10	0	20	View
5011588	chr9	2	4	5	11	View
5016454	chr9	0	0	0	0	View
5016455	chr9	0	0	0	0	View
5016456	chr9	1	2	15	18	View
5017862	chr9	2	0	0	2	View
5017863	chr9	2	0	0	2	View
5017864	chr9	2	3	2	7	View

Data ID	Experiment type	Sample number	Platform
C   GSE183048	Chip-seq	24	Illumina HiSeq 4000 (Homo sapiens)
GSE169622	Methylation profiling (Array)	9	Infinium MethylationEPIC
GSE65858	Expression array	270	Illumina HumanHT-12 V4.0 expression beadchip
GSE181805	Expression array	25	[HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215	RNA-seq	8	Illumina NovaSeq 6000 (Homo sapiens)
GSE138080	Expression array	35	Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version)
GSE140662	Expression array	8	[HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
E   GSE55542	Expression array	36	Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
C   GSE143026	ATAC-seq;Chip-seq;RNA-seq	30	Illumina HiSeq 2500 (Homo sapiens)
TCGA_CESC	DNA methylation sequencing;RNA-seq	288	TCGA
GSE51993	Expression array	48	Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip
E   GSE55550	Expression array	155	Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
GSE165883	RNA-seq	20	Illumina NextSeq 500 (Homo sapiens)

• Expression profiling
• Genome binding/occupancy profiling

When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.

> Dataset: GSE55542 - LINGO2 expression across samples

Volcano Plot

Bar Plot

> Dataset: GSE55550 - LINGO2 expression across samples

Volcano Plot

Bar Plot