HPV Target gene Detail Information

> LIPE-AS1 Gene Search Result


Gene Information
Gene Name LIPE-AS1
Gene ID 100996307
Gene Full Name LIPE antisense RNA 1
Gene Alias -
Transcripts ENSG00000213904
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:48589
lncRNASNP2 ID LIPE-AS1
Target gene [LIPE-AS1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5003498 chr19 3 0 0 3 View
5009203 chr19 145 155 15 315 View
5017268 chr19 117 58 17 192 View
5017269 chr19 129 74 27 230 View

Target gene [LIPE-AS1] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE139324 scRNA-seq 63 Illumina NextSeq 500 (Homo sapiens)
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE65858 Expression array 270 Illumina HumanHT-12 V4.0 expression beadchip
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - LIPE-AS1 peak across samples

Peak Plot

> Dataset: GSE143026 - LIPE-AS1 peak across samples

Peak Plot