HPV Target gene Detail Information

> MAGI2 Gene Search Result


Gene Information
Gene Name MAGI2
Gene ID 9863
Gene Full Name membrane associated guanylate kinase, WW and PDZ domain containing 2
Gene Alias ACVRIP1|AIP-1|AIP1|ARIP1|MAGI-2|NPHS15|SSCAM
Transcripts ENSG00000187391
Virus HPV
Gene Type protein-coding
HPA Location Info
Membrane Info Disease related genes, Human disease related genes, Potential drug targets, Predicted intracellular proteins, Transporters
Uniport_ID Q86UL8
HGNC ID HGNC:18957
OMIM ID 606382
Summary The protein encoded by this gene interacts with atrophin-1. Atrophin-1 contains a polyglutamine repeat, expansion of which is responsible for dentatorubral and pallidoluysian atrophy. This encoded protein is characterized by two WW domains, a guanylate kinase-like domain, and multiple PDZ domains. It has structural similarity to the membrane-associated guanylate kinase homologue (MAGUK) family. [provided by RefSeq, Jul 2008]
Target gene [MAGI2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5004234 chr7 1 0 0 1 View
5004690 chr7 0 0 0 0 View
5005599 chr7 2 0 33 35 View
5007947 chr7 1 0 0 1 View
5009703 chr7 0 0 0 0 View
5009843 chr7 1 0 0 1 View
5009844 chr7 0 0 0 0 View
5011680 chr7 3 1 0 4 View
5016243 chr7 22 2 1 25 View
5016244 chr7 6 4 0 10 View
5016245 chr7 15 3 0 18 View
5016785 chr7 2 0 2 4 View
5016786 chr7 5 0 1 6 View
5017756 chr7 0 2 0 2 View
5017757 chr7 0 0 0 0 View
5017758 chr7 1 1 0 2 View
5017759 chr7 4 0 0 4 View

Target gene [MAGI2] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE65858 Expression array 270 Illumina HumanHT-12 V4.0 expression beadchip
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE55542 Expression array 36 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip
GSE55550 Expression array 155 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - MAGI2 peak across samples

Peak Plot

> Dataset: GSE143026 - MAGI2 peak across samples

Peak Plot