HPV Target gene Detail Information

> PRR30 Gene Search Result


Gene Information
Gene Name PRR30
Gene ID 339779
Gene Full Name proline rich 30
Gene Alias C2orf53
Transcripts ENSG00000186143
Virus HPV
Gene Type protein-coding
HPA Location Info
Membrane Info Predicted intracellular proteins
Uniport_ID Q53SZ7
HGNC ID HGNC:28677
Target gene [PRR30] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5002115 chr2 13 2 0 15 View
5003215 chr2 4 1 0 5 View
5003371 chr2 3 1 0 4 View
5014056 chr2 3 2 0 5 View
5015422 chr2 0 1 0 1 View
5015423 chr2 4 2 0 6 View

Target gene [PRR30] related to Omics data
Data ID Experiment type Sample number Platform
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE143026 - PRR30 peak across samples

Peak Plot