HPV Target gene Detail Information

> SLC27A6 Gene Search Result


Gene Information
Gene Name SLC27A6
Gene ID 28965
Gene Full Name solute carrier family 27 member 6
Gene Alias ACSVL2|FACVL2|FATP6|VLCS-H1
Transcripts ENSG00000113396
Virus HPV
Gene Type protein-coding
HPA Location Info Nuclear bodies;
Membrane Info Enzymes, Metabolic proteins, Predicted intracellular proteins, Predicted membrane proteins, Transporters
Uniport_ID Q9Y2P4
HGNC ID HGNC:11000
OMIM ID 604196
Summary This gene encodes a member of the fatty acid transport protein family (FATP). FATPs are involved in the uptake of long-chain fatty acids and have unique expression patterns. Alternatively spliced transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Jul 2008]
Target gene [SLC27A6] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5011289 chr5 0 0 0 0 View
5011842 chr5 0 0 0 0 View

Target gene [SLC27A6] related to Omics data
Data ID Experiment type Sample number Platform
M
  GSE169622 		Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE65858 Expression array 270 Illumina HumanHT-12 V4.0 expression beadchip
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE138080 Expression array 35 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE55542 Expression array 36 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
E
 
M
  TCGA_CESC 		DNA methylation sequencing;RNA-seq 288 TCGA
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip
GSE55550 Expression array 155 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: TCGA_CESC - SLC27A6 expression across samples

Volcano Plot

Bar Plot