HPV Target gene Detail Information

> SLX4IP Gene Search Result


Gene Information
Gene Name SLX4IP
Gene ID 128710
Gene Full Name SLX4 interacting protein
Gene Alias C20orf94|bA204H22.1|bA254M13.1|dJ1099D15.3
Transcripts ENSG00000149346
Virus HPV
Gene Type protein-coding
HPA Location Info Cytosol;
Membrane Info Disease related genes, Predicted intracellular proteins
Uniport_ID Q5VYV7
HGNC ID HGNC:16225
OMIM ID 615958
Target gene [SLX4IP] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5010063 chr20 3 190 6 199 View
5011991 chr20 7 13 17 37 View

Target gene [SLX4IP] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048
Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE65858 Expression array 270 Illumina HumanHT-12 V4.0 expression beadchip
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE138080 Expression array 35 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
C
  GSE143026
ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - SLX4IP peak across samples

Peak Plot


> Dataset: GSE143026 - SLX4IP peak across samples

Peak Plot