HPV Target gene Detail Information

> SNORA23 Gene Search Result


Gene Information
Gene Name SNORA23
Gene ID 677808
Gene Full Name small nucleolar RNA, H/ACA box 23
Gene Alias ACA23
Transcripts ENSG00000201998
Virus HPV
Gene Type snoRNA
HGNC ID HGNC:32613
Summary Predicted to be involved in RNA processing. Predicted to be located in nucleolus. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [SNORA23] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5017014 chr11 3 10 0 13 View
5017015 chr11 104 2 4 110 View
5017016 chr11 104 3 4 111 View
5017017 chr11 1 1 1 3 View
5017019 chr11 6 2 0 8 View
5017020 chr11 6 2 0 8 View
5017021 chr11 6 3 0 9 View
5017022 chr11 1 0 0 1 View
5017023 chr11 1 3 0 4 View
5017024 chr11 1 3 0 4 View

Target gene [SNORA23] related to Omics data
Data ID Experiment type Sample number Platform
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE65858 Expression array 270 Illumina HumanHT-12 V4.0 expression beadchip
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
E
  GSE55542 		Expression array 36 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip
GSE55550 Expression array 155 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE55542 - SNORA23 expression across samples

Volcano Plot

Bar Plot