All Curated Mutation Sites in SARS-CoV-2 
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 The Virus Mutation(VM) module provides researchers the annotations of reported pathogenic mutations in SARS-CoV-2 related to human diseases. The curated VM information includes mutation site, mutation level, virus gene/protein/region, virus-associated disease, genotype/subtype, literature evidence, etc.


Browse Data by Virus Gene/Protein/Region, Disease OR Description
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For highly variable viruses (e.g., HBV, HIV, SARS-CoV-2), ViMIC defaults to displaying mutations in a specific region. Click the green button to search for other regions, or click "Show All" to view all mutations (loading speed may be affected by network conditions).

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ORF1a
  
ORF1b
  
ORF3a
  
3CLpro
  
3'UTR
  
5'UTR
  
RBD
  
ORF7b-ORF8
  
upstream of N
  
Furin cleavage site
  
E
  
endoRNase
  
Exonuclease
  
S
  
NSP13
  
NSP3
  
M
  
Mpro
  
Methyltransferase
  
N
  
NSP14
  
NSP12
  
Non-coding region
  
NP
  
NS3
  
NS7a
  
NS7b
  
NS8
  
NSP5
  
NSP1
  
NSP10
  
NSP11
  
NSP15
  
NSP16
  
NSP2
  
NSP4
  
NSP6
  
NSP7
  
NSP8
  
NSP9
  
NTD
  
ORF8
  
ORF1ab
  
ORF9b
  
ORF10
  
ORF3
  
ORF6
  
ORF7a
  
ORF7b
  
ORF9
  
ORF9c
  
PLpro
  
RdRp
  
RBM
  
Replicase
  
RNA primase
  

Keyword: COVID-19-37060743
ID PMID Mutation Gene/Protein/Region Encoding Gene/Protein Disease Description Detail
1 37060743 T21I
3CLpro
ORF1a
COVID-19
D
G
L
View
2 37060743 G15S
3CLpro
ORF1a
COVID-19
D
G
L
View
3 37060743 A173T
3CLpro
ORF1a
COVID-19
D
View
4 37060743 A173V
3CLpro
ORF1a
COVID-19
D
View
5 37060743 D248E
3CLpro
ORF1a
COVID-19
D
View
6 37060743 D48Y
3CLpro
ORF1a
COVID-19
D
View
7 37060743 E166A
3CLpro
ORF1a
COVID-19
D
View
8 37060743 E166G
3CLpro
ORF1a
COVID-19
D
View
9 37060743 E166V
3CLpro
ORF1a
COVID-19
D
View
10 37060743 F140A
3CLpro
ORF1a
COVID-19
D
View
11 37060743 F140L
3CLpro
ORF1a
COVID-19
D
View
12 37060743 H164N
3CLpro
ORF1a
COVID-19
D
View
13 37060743 H172F
3CLpro
ORF1a
COVID-19
D
View
14 37060743 H172Q
3CLpro
ORF1a
COVID-19
D
View
15 37060743 H172Y
3CLpro
ORF1a
COVID-19
D
View
16 37060743 L167F
3CLpro
ORF1a
COVID-19
D
View
17 37060743 L50F
3CLpro
ORF1a
COVID-19
D
View
18 37060743 M165T
3CLpro
ORF1a
COVID-19
D
View
19 37060743 M49I
3CLpro
ORF1a
COVID-19
D
View
20 37060743 M49L
3CLpro
ORF1a
COVID-19
D
View
21 37060743 P252L
3CLpro
ORF1a
COVID-19
D
View
22 37060743 Q189K
3CLpro
ORF1a
COVID-19
D
View
23 37060743 Q192L
3CLpro
ORF1a
COVID-19
D
View
24 37060743 Q192P
3CLpro
ORF1a
COVID-19
D
View
25 37060743 Q192S
3CLpro
ORF1a
COVID-19
D
View
26 37060743 Q192T
3CLpro
ORF1a
COVID-19
D
View
27 37060743 S144A
3CLpro
ORF1a
COVID-19
D
View
28 37060743 S144E
3CLpro
ORF1a
COVID-19
D
View
29 37060743 S144F
3CLpro
ORF1a
COVID-19
D
View
30 37060743 S144G
3CLpro
ORF1a
COVID-19
D
View
31 37060743 S144T
3CLpro
ORF1a
COVID-19
D
View
32 37060743 T135I
3CLpro
ORF1a
COVID-19
D
View
33 37060743 T304I
3CLpro
ORF1a
COVID-19
D
View
34 37060743 T45I
3CLpro
ORF1a
COVID-19
D
View
35 37060743 V186G
3CLpro
ORF1a
COVID-19
D
View
36 37060743 Y54A
3CLpro
ORF1a
COVID-19
D
View
37 37060743 Y54C
3CLpro
ORF1a
COVID-19
D
View
Contents
Description

The table shows all curated mutation sites of SARS-CoV-2 in each literature

Table Description Column Note
D
The study mentioned a certain treatment method, such as drug resistance caused by mutations.
G
The study mentioned the virus genotype/subtype information.
R
The study mentioned the reference sequence used for comparison, or the original strain of the virus used for site-directed mutagenesis.
S
The study provided sequence information or accession numbers.
L
The study provided the geographic region/country of data origin.
C
The study provided clinical baseline information.
I
The study involved information related to immune.
T
The study involved host target genes.