All Curated Mutation Sites in SARS-CoV-2 
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 The Virus Mutation(VM) module provides researchers the annotations of reported pathogenic mutations in SARS-CoV-2 related to human diseases. The curated VM information includes mutation site, mutation level, virus gene/protein/region, virus-associated disease, genotype/subtype, literature evidence, etc.


Browse Data by Virus Gene/Protein/Region, Disease OR Description
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For highly variable viruses (e.g., HBV, HIV, SARS-CoV-2), ViMIC defaults to displaying mutations in a specific region. Click the green button to search for other regions, or click "Show All" to view all mutations (loading speed may be affected by network conditions).

Show All
  
ORF1a
  
ORF1b
  
ORF3a
  
3CLpro
  
3'UTR
  
5'UTR
  
RBD
  
ORF7b-ORF8
  
upstream of N
  
Furin cleavage site
  
E
  
endoRNase
  
Exonuclease
  
S
  
NSP13
  
NSP3
  
M
  
Mpro
  
Methyltransferase
  
N
  
NSP14
  
NSP12
  
Non-coding region
  
NP
  
NS3
  
NS7a
  
NS7b
  
NS8
  
NSP5
  
NSP1
  
NSP10
  
NSP11
  
NSP15
  
NSP16
  
NSP2
  
NSP4
  
NSP6
  
NSP7
  
NSP8
  
NSP9
  
NTD
  
ORF8
  
ORF1ab
  
ORF9b
  
ORF10
  
ORF3
  
ORF6
  
ORF7a
  
ORF7b
  
ORF9
  
ORF9c
  
PLpro
  
RdRp
  
RBM
  
Replicase
  
RNA primase
  

Keyword: COVID-19-37270625
ID PMID Mutation Gene/Protein/Region Encoding Gene/Protein Disease Description Detail
1 37270625 A484V
S
S
COVID-19
G
R
S
C
L
View
2 37270625 A688V
S
S
COVID-19
G
R
S
C
L
View
3 37270625 E484V
S
S
COVID-19
G
R
S
C
L
View
4 37270625 E96D
S
S
COVID-19
G
R
S
C
L
View
5 37270625 F981L
S
S
COVID-19
G
R
S
C
L
View
6 37270625 H681R
S
S
COVID-19
G
R
S
C
L
View
7 37270625 L167T
S
S
COVID-19
G
R
S
C
L
View
8 37270625 L455W
S
S
COVID-19
G
R
S
C
L
View
9 37270625 R346T
S
S
COVID-19
G
R
S
C
L
View
10 37270625 S477D
S
S
COVID-19
G
R
S
C
L
View
11 37270625 D936Y
S
S
COVID-19
G
R
S
C
L
View
12 37270625 E1195G
S
S
COVID-19
G
R
S
C
L
View
13 37270625 L981F
S
S
COVID-19
G
R
S
C
L
View
14 37270625 N978D
S
S
COVID-19
G
R
S
C
L
View
15 37270625 S982L
S
S
COVID-19
G
R
S
C
L
View
16 37270625 V963F
S
S
COVID-19
G
R
S
C
L
View
17 37270625 F456L
RBD
S
COVID-19
G
R
S
C
L
View
18 37270625 K356T
RBD
S
COVID-19
G
R
S
C
L
View
19 37270625 K458M
RBD
S
COVID-19
G
R
S
C
L
View
20 37270625 M458K
RBD
S
COVID-19
G
R
S
C
L
View
21 37270625 N448S
RBD
S
COVID-19
G
R
S
C
L
View
22 37270625 P384L
RBD
S
COVID-19
G
R
S
C
L
View
23 37270625 S371F
RBD
S
COVID-19
G
R
S
C
L
View
24 37270625 V445A
RBD
S
COVID-19
G
R
S
C
L
View
25 37270625 S254F
NTD
S
COVID-19
G
R
S
C
L
View
26 37270625 N679K
Furin cleavage site
S
COVID-19
G
R
S
C
L
View
27 37270625 P681Y
Furin cleavage site
S
COVID-19
G
R
S
C
L
View
28 37270625 K548M
S
S
COVID-19
G
R
S
C
L
View
29 37270625 P681R
S
S
COVID-19
G
R
S
C
L
View
30 37270625 T24I
ORF7a
ORF7a
COVID-19
G
R
S
C
L
View
31 37270625 T39I
ORF7a
ORF7a
COVID-19
G
R
S
C
L
View
32 37270625 T6001C
ORF1a
ORF1a
COVID-19
G
R
S
C
L
View
33 37270625 A67V
S
S
COVID-19
G
R
S
C
L
View
34 37270625 D614G
S
S
COVID-19
G
R
S
C
L
View
35 37270625 D796Y
S
S
COVID-19
G
R
S
C
L
View
36 37270625 G339D
S
S
COVID-19
G
R
S
C
L
View
37 37270625 G446S
S
S
COVID-19
G
R
S
C
L
View
38 37270625 G496S
S
S
COVID-19
G
R
S
C
L
View
39 37270625 H655Y
S
S
COVID-19
G
R
S
C
L
View
40 37270625 K417N
S
S
COVID-19
G
R
S
C
L
View
41 37270625 L212I
S
S
COVID-19
G
R
S
C
L
View
42 37270625 N440K
S
S
COVID-19
G
R
S
C
L
View
43 37270625 N501Y
S
S
COVID-19
G
R
S
C
L
View
44 37270625 N764K
S
S
COVID-19
G
R
S
C
L
View
45 37270625 N856K
S
S
COVID-19
G
R
S
C
L
View
46 37270625 N969K
S
S
COVID-19
G
R
S
C
L
View
47 37270625 P681H
S
S
COVID-19
G
R
S
C
L
View
48 37270625 Q493R
S
S
COVID-19
G
R
S
C
L
View
49 37270625 Q498R
S
S
COVID-19
G
R
S
C
L
View
50 37270625 Q954H
S
S
COVID-19
G
R
S
C
L
View
51 37270625 S371L
S
S
COVID-19
G
R
S
C
L
View
52 37270625 S373P
S
S
COVID-19
G
R
S
C
L
View
53 37270625 S375F
S
S
COVID-19
G
R
S
C
L
View
54 37270625 S477N
S
S
COVID-19
G
R
S
C
L
View
55 37270625 T478K
S
S
COVID-19
G
R
S
C
L
View
56 37270625 T547K
S
S
COVID-19
G
R
S
C
L
View
57 37270625 T95I
S
S
COVID-19
G
R
S
C
L
View
58 37270625 Y145D
S
S
COVID-19
G
R
S
C
L
View
59 37270625 Y505H
S
S
COVID-19
G
R
S
C
L
View
Contents
Description

The table shows all curated mutation sites of SARS-CoV-2 in each literature

Table Description Column Note
D
The study mentioned a certain treatment method, such as drug resistance caused by mutations.
G
The study mentioned the virus genotype/subtype information.
R
The study mentioned the reference sequence used for comparison, or the original strain of the virus used for site-directed mutagenesis.
S
The study provided sequence information or accession numbers.
L
The study provided the geographic region/country of data origin.
C
The study provided clinical baseline information.
I
The study involved information related to immune.
T
The study involved host target genes.