All Curated Mutation Sites in SARS-CoV-2

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The Virus Mutation(VM) module provides researchers the annotations of reported pathogenic mutations in SARS-CoV-2 related to human diseases. The curated VM information includes mutation site, mutation level, virus gene/protein/region, virus-associated disease, genotype/subtype, literature evidence, etc.

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Virus Gene/Protein

Disease

Description

For highly variable viruses (e.g., HBV, HIV, SARS-CoV-2), ViMIC defaults to displaying mutations in a specific region. Click the green button to search for other regions, or click "Show All" to view all mutations (loading speed may be affected by network conditions).

Furin cleavage site

Methyltransferase

Non-coding region

Keyword: COVID-19-38601946

ID	PMID	Mutation	Gene/Protein/Region	Encoding Gene/Protein	Disease	Description	Detail
1	38601946	C25810T	ORF3a	ORF3a	COVID-19	G R C L	View
2	38601946	L140F	ORF3a	ORF3a	COVID-19	G R C L	View
3	38601946	C8991T	ORF1a	ORF1a	COVID-19	G R C L	View
4	38601946	A2909V	ORF1a	ORF1a	COVID-19	G R C L	View
5	38601946	C22227T	S	S	COVID-19	G R C L	View
6	38601946	A222V	S	S	COVID-19	G R C L	View
7	38601946	C1403T	ORF1a	ORF1a	COVID-19	G R C L	View
8	38601946	P380S	ORF1a	ORF1a	COVID-19	G R C L	View
9	38601946	C5184T	ORF1a	ORF1a	COVID-19	G R C L	View
10	38601946	P1640L	ORF1a	ORF1a	COVID-19	G R C L	View
11	38601946	C9891T	ORF1a	ORF1a	COVID-19	G R C L	View
12	38601946	A3209V	ORF1a	ORF1a	COVID-19	G R C L	View
13	38601946	T11418C	ORF1a	ORF1a	COVID-19	G R C L	View
14	38601946	V3718A	ORF1a	ORF1a	COVID-19	G R C L	View
15	38601946	C11514T	ORF1a	ORF1a	COVID-19	G R C L	View
16	38601946	T3750I	ORF1a	ORF1a	COVID-19	G R C L	View
17	38601946	C26408T	E	E	COVID-19	G R C L	View
18	38601946	S55F	E	E	COVID-19	G R C L	View
19	38601946	C27509T	ORF7a	ORF7a	COVID-19	G R C L	View
20	38601946	T39I	ORF7a	ORF7a	COVID-19	G R C L	View
21	38601946	C14120T	ORF1b	ORF1b	COVID-19	G R C L	View
22	38601946	P218L	ORF1b	ORF1b	COVID-19	G R C L	View
23	38601946	G7042T	ORF1a	ORF1a	COVID-19	G R C L	View
24	38601946	M2259I	ORF1a	ORF1a	COVID-19	G R C L	View
25	38601946	G26558T	M	M	COVID-19	G R C L	View
26	38601946	E12D	M	M	COVID-19	G R C L	View
27	38601946	C26305T	E	E	COVID-19	G R C L	View
28	38601946	L21F	E	E	COVID-19	G R C L	View

Contents
Description

The table shows all curated mutation sites of SARS-CoV-2 in each literature

Table Description Column Note

D
The study mentioned a certain treatment method, such as drug resistance caused by mutations.

G
The study mentioned the virus genotype/subtype information.

R
The study mentioned the reference sequence used for comparison, or the original strain of the virus used for site-directed mutagenesis.

S
The study provided sequence information or accession numbers.

L
The study provided the geographic region/country of data origin.

C
The study provided clinical baseline information.

I
The study involved information related to immune.

T
The study involved host target genes.