All Curated Mutation Sites in SARS-CoV-2 
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 The Virus Mutation(VM) module provides researchers the annotations of reported pathogenic mutations in SARS-CoV-2 related to human diseases. The curated VM information includes mutation site, mutation level, virus gene/protein/region, virus-associated disease, genotype/subtype, literature evidence, etc.


Browse Data by Virus Gene/Protein/Region, Disease OR Description
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For highly variable viruses (e.g., HBV, HIV, SARS-CoV-2), ViMIC defaults to displaying mutations in a specific region. Click the green button to search for other regions, or click "Show All" to view all mutations (loading speed may be affected by network conditions).

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ORF1a
  
ORF1b
  
ORF3a
  
3CLpro
  
3'UTR
  
5'UTR
  
RBD
  
ORF7b-ORF8
  
upstream of N
  
Furin cleavage site
  
E
  
endoRNase
  
Exonuclease
  
S
  
NSP13
  
NSP3
  
M
  
Mpro
  
Methyltransferase
  
N
  
NSP14
  
NSP12
  
Non-coding region
  
NP
  
NS3
  
NS7a
  
NS7b
  
NS8
  
NSP5
  
NSP1
  
NSP10
  
NSP11
  
NSP15
  
NSP16
  
NSP2
  
NSP4
  
NSP6
  
NSP7
  
NSP8
  
NSP9
  
NTD
  
ORF8
  
ORF1ab
  
ORF9b
  
ORF10
  
ORF3
  
ORF6
  
ORF7a
  
ORF7b
  
ORF9
  
ORF9c
  
PLpro
  
RdRp
  
RBM
  
Replicase
  
RNA primase
  

Keyword: 5'UTR
ID PMID Mutation Gene/Protein/Region Encoding Gene/Protein Disease Description Detail
1 36512569 C241T
5'UTR

G
R
L
View
2 35706980 G236T
5'UTR

S
C
L
View
3 35726918 C241T
5'UTR

R
S
L
View
4 38476954 C241T
5'UTR
COVID-19
G
R
S
L
View
5 37275159 C241T
5'UTR
COVID-19
G
R
S
C
L
View
6 35189404 C241T
5'UTR
COVID-19
G
R
L
View
7 37744926 C44T
5'UTR
COVID-19
G
R
S
C
L
View
8 37376693 C241T
5'UTR
COVID-19
G
R
S
L
View
9 34764315 G114T
5'UTR
COVID-19
G
R
L
View
10 37573409 C241T
5'UTR
COVID-19
G
R
S
C
L
View
11 33738124 C241T
5'UTR
COVID-19
G
R
S
C
L
View
12 33329480 C241T
5'UTR
COVID-19
G
R
L
View
13 38605705 C44T
5'UTR
COVID-19
G
R
S
C
L
View
14 38605705 G210T
5'UTR
COVID-19
G
R
S
C
L
View
15 38605705 C241T
5'UTR
COVID-19
G
R
S
C
L
View
16 38632523 C241T
5'UTR
COVID-19
G
R
L
View
17 32793182 C241T
5'UTR
COVID-19
R
View
18 36016239 C241T
5'UTR
COVID-19
R
L
View
19 40143342 C241T
5'UTR
COVID-19
R
S
L
View
20 32595354 C241T
5'UTR
COVID-19
R
L
View
21 32595354 C228T
5'UTR
COVID-19
R
L
View
22 37260697 C241T
5'UTR
COVID-19
R
S
C
L
View
23 32780783 A187G
5'UTR
COVID-19
R
View
24 32780783 C241T
5'UTR
COVID-19
R
View
25 35891618 C241T
5'UTR
COVID-19
S
L
View
26 32937868 C241T
5'UTR
COVID-19
R
L
View
27 38668234 C241T
5'UTR
COVID-19
R
C
L
View
28 32515358 C241T
5'UTR
COVID-19
R
L
View
29 32595352 C241T
5'UTR
COVID-19
R
View
30 35759503 C241T
5'UTR
COVID-19
R
L
View
31 33184173 C241T
5'UTR
COVID-19
View
32 34307830 C241T
5'UTR
Cell line
View
Contents
Description

The table shows all curated mutation sites of SARS-CoV-2 in each literature

Table Description Column Note
D
The study mentioned a certain treatment method, such as drug resistance caused by mutations.
G
The study mentioned the virus genotype/subtype information.
R
The study mentioned the reference sequence used for comparison, or the original strain of the virus used for site-directed mutagenesis.
S
The study provided sequence information or accession numbers.
L
The study provided the geographic region/country of data origin.
C
The study provided clinical baseline information.
I
The study involved information related to immune.
T
The study involved host target genes.