ZIKV Target gene Detail Information

> ATF4 Gene Search Result


Gene Information
Gene Name ATF4
Gene ID 468
Gene Full Name activating transcription factor 4
Gene Alias CREB-2|CREB2|TAXREB67|TXREB
Transcripts ENSG00000128272
Virus ZIKV
Gene Type protein-coding
HPA Location Info Nucleoplasm;
Membrane Info Predicted intracellular proteins, Transcription factors
Uniport_ID P18848
HGNC ID HGNC:786
OMIM ID 604064
Summary This gene encodes a transcription factor that was originally identified as a widely expressed mammalian DNA binding protein that could bind a tax-responsive enhancer element in the LTR of HTLV-1. The encoded protein was also isolated and characterized as the cAMP-response element binding protein 2 (CREB-2). The protein encoded by this gene belongs to a family of DNA-binding proteins that includes the AP-1 family of transcription factors, cAMP-response element binding proteins (CREBs) and CREB-like proteins. These transcription factors share a leucine zipper region that is involved in protein-protein interactions, located C-terminal to a stretch of basic amino acids that functions as a DNA binding domain. Two alternative transcripts encoding the same protein have been described. Two pseudogenes are located on the X chromosome at q28 in a region containing a large inverted duplication. [provided by RefSeq, Sep 2011]
Target gene [ATF4] related to virus gene/protein/region

Mutation Table: if previous studies reported that target gene was related to virus gene/region/protein, the information in this literature was listed in this section


ID PMID Mutation Gene/Protein/Region Encoding Gene/Protein Disease Description Detail
1 40291117 N154A
E
envelope
Cell line
D
R
T
View
2 40291117 N154D
E
envelope
Cell line
D
R
I
T
View
3 40291117 V153D
E
envelope
Cell line
D
R
I
T
View

Target gene [ATF4] related to Omics data
Data ID Experiment type Sample number Platform
GSE198542 RNA-seq 12 Illumina NextSeq 500 (Homo sapiens)
GSE176428 RNA-seq 8 Illumina MiSeq (Homo sapiens)
GSE78711 RNA-seq 8 Illumina MiSeq (Homo sapiens);Illumina NextSeq 500 (Homo sapiens)
GSE178621 RNA-seq 28 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE161783
Chip-seq;RNA-seq;csRNA-seq 51 Illumina NextSeq 500 (Homo sapiens);Illumina HiSeq 4000 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE105884 RNA-seq 60 Illumina HiSeq 2500 (Homo sapiens)
GSE209698 RNA-seq 16 Illumina NextSeq 500 (Homo sapiens)
GSE123835 RNA-seq 6 Illumina HiSeq 2500 (Homo sapiens)
GSE160201 RNA-seq 16 Illumina NextSeq 500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE161783 - ATF4 peak across samples

Peak Plot