HPV Target gene Detail Information

> ATRNL1 Gene Search Result


Gene Information
Gene Name ATRNL1
Gene ID 26033
Gene Full Name attractin like 1
Gene Alias ALP|bA338L11.1|bA454H24.1
Transcripts ENSG00000107518
Virus HPV
Gene Type protein-coding
HPA Location Info Nucleoplasm, Mitochondria;
Membrane Info Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q5VV63
HGNC ID HGNC:29063
OMIM ID 612869
Summary Predicted to enable Notch binding activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [ATRNL1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5004079 chr10 1 0 0 1 View
5005058 chr10 0 0 0 0 View
5006942 chr10 4 0 0 4 View
5006943 chr10 35 6 0 41 View
5014744 chr10 0 0 0 0 View

Target gene [ATRNL1] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE40774 Expression array 134 Agilent-026652 Whole Human Genome Microarray 4x44K v2 (Probe Name version)
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE55542 Expression array 36 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip
GSE55550 Expression array 155 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - ATRNL1 peak across samples

Peak Plot

> Dataset: GSE143026 - ATRNL1 peak across samples

Peak Plot