HPV Target gene Detail Information

> CENPC Gene Search Result


Gene Information
Gene Name CENPC
Gene ID 1060
Gene Full Name centromere protein C
Gene Alias CENP-C|CENPC1|MIF2|hcp-4
Transcripts ENSG00000145241
Virus HPV
Gene Type protein-coding
HPA Location Info Nuclear bodies, Kinetochore;Nucleoplasm, Midbody;
Membrane Info Predicted intracellular proteins
Uniport_ID Q03188
HGNC ID HGNC:1854
OMIM ID 117141
Summary Centromere protein C 1 is a centromere autoantigen and a component of the inner kinetochore plate. The protein is required for maintaining proper kinetochore size and a timely transition to anaphase. A putative pseudogene exists on chromosome 12. [provided by RefSeq, Jul 2008]
Target gene [CENPC] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5005731 chr4 0 0 0 0 View
5011322 chr4 1 5 2 8 View
5017603 chr4 3 6 9 18 View
5017604 chr4 0 0 0 0 View
5017605 chr4 7 282 22 311 View
5017606 chr4 7 359 30 396 View
5017607 chr4 0 0 0 0 View
5017608 chr4 1 0 1 2 View
5017609 chr4 1 0 0 1 View
5017610 chr4 7 1 0 8 View
5017611 chr4 1 1 0 2 View

Target gene [CENPC] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE226620 scRNA-seq 30 HiSeq X Ten (Homo sapiens)
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE65858 Expression array 270 Illumina HumanHT-12 V4.0 expression beadchip
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE138080 Expression array 35 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE197461 scRNA-seq 16 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - CENPC peak across samples

Peak Plot

> Dataset: GSE143026 - CENPC peak across samples

Peak Plot