Gene Name	IFT140
Gene ID	9742
Gene Full Name	intraflagellar transport 140
Gene Alias	CED5|MZSDS|PKD9|RP80|SRTD9|WDTC2|c305C8.4|c380F5.1|gs114
Transcripts	ENSG00000187535
Virus	HPV
Gene Type	protein-coding
HPA Location Info	Basal body;Nucleoplasm, Mitochondria;
Membrane Info	Disease related genes, Human disease related genes, Predicted intracellular proteins
Uniport_ID	Q96RY7
HGNC ID	HGNC:29077
OMIM ID	614620
Summary	This gene encodes one of the subunits of the intraflagellar transport (IFT) complex A. Intraflagellar transport is involved in the genesis, resorption and signaling of primary cilia. The primary cilium is a microtubule-based sensory organelle at the surface of most quiescent mammalian cells, that receives signals from its environment, such as the flow of fluid, light or odors, and transduces those signals to the nucleus. Loss of the corresponding protein in mouse results in renal cystic disease. [provided by RefSeq, Jun 2012]

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5000619	chr16	116	2	0	118	View
5000737	chr16	91	2	0	93	View
5002293	chr16	12	1	0	13	View
5002294	chr16	12	1	0	13	View
5002295	chr16	12	1	0	13	View
5002296	chr16	12	1	0	13	View
5002486	chr16	11	0	0	11	View
5002582	chr16	6	0	4	10	View
5002585	chr16	6	1	3	10	View
5002595	chr16	9	1	0	10	View
5002683	chr16	8	1	0	9	View
5002789	chr16	7	1	0	8	View
5009799	chr16	8	1	0	9	View
5011833	chr16	11	1	0	12	View
5017178	chr16	6	2	0	8	View
5017179	chr16	8	1	0	9	View

Data ID	Experiment type	Sample number	Platform
C   GSE183048	Chip-seq	24	Illumina HiSeq 4000 (Homo sapiens)
GSE40774	Expression array	134	Agilent-026652 Whole Human Genome Microarray 4x44K v2 (Probe Name version)
GSE169622	Methylation profiling (Array)	9	Infinium MethylationEPIC
GSE65858	Expression array	270	Illumina HumanHT-12 V4.0 expression beadchip
GSE181805	Expression array	25	[HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215	RNA-seq	8	Illumina NovaSeq 6000 (Homo sapiens)
GSE138080	Expression array	35	Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version)
GSE140662	Expression array	8	[HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE55542	Expression array	36	Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
C   GSE143026	ATAC-seq;Chip-seq;RNA-seq	30	Illumina HiSeq 2500 (Homo sapiens)
TCGA_CESC	DNA methylation sequencing;RNA-seq	288	TCGA
GSE51993	Expression array	48	Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip
GSE55550	Expression array	155	Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
GSE165883	RNA-seq	20	Illumina NextSeq 500 (Homo sapiens)

• Genome binding/occupancy profiling

When the gene can detect a peak in the dataset, a peak plot will be displayed.

> Dataset: GSE183048 - IFT140 peak across samples

Peak Plot

> Dataset: GSE143026 - IFT140 peak across samples

Peak Plot