HPV Target gene Detail Information

> KLF12 Gene Search Result


Gene Information
Gene Name KLF12
Gene ID 11278
Gene Full Name KLF transcription factor 12
Gene Alias AP-2rep|AP2REP|HSPC122
Transcripts ENSG00000118922
Virus HPV
Gene Type protein-coding
HPA Location Info Nucleoplasm;Cytosol;
Membrane Info Predicted intracellular proteins, Transcription factors
Uniport_ID Q9Y4X4
HGNC ID HGNC:6346
OMIM ID 607531
Summary Activator protein-2 alpha (AP-2 alpha) is a developmentally-regulated transcription factor and important regulator of gene expression during vertebrate development and carcinogenesis. The protein encoded by this gene is a member of the Kruppel-like zinc finger protein family and can repress expression of the AP-2 alpha gene by binding to a specific site in the AP-2 alpha gene promoter. Repression by the encoded protein requires binding with a corepressor, CtBP1. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]
Target gene [KLF12] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5000268 chr13 370 9 24 403 View
5000269 chr13 370 9 24 403 View
5000435 chr13 29 5 174 208 View
5000655 chr13 92 6 11 109 View
5000666 chr13 91 6 9 106 View
5000712 chr13 86 5 6 97 View
5000765 chr13 84 2 2 88 View
5000825 chr13 76 1 2 79 View
5000977 chr13 6 40 17 63 View
5001484 chr13 17 13 2 32 View
5001773 chr13 23 0 0 23 View
5001891 chr13 19 0 1 20 View
5001940 chr13 19 0 0 19 View
5001999 chr13 18 0 0 18 View
5002001 chr13 6 6 6 18 View
5002679 chr13 9 0 0 9 View
5003859 chr13 0 1 1 2 View
5004255 chr13 0 1 0 1 View
5004720 chr13 2885 3286 1183 7354 View
5004755 chr13 1 1 1 3 View
5004770 chr13 9 5 0 14 View
5005955 chr13 19 2 0 21 View
5006619 chr13 9 5 0 14 View
5006635 chr13 9 5 0 14 View
5007040 chr13 4 9 5 18 View
5007041 chr13 6 2 0 8 View
5010084 chr13 10 1 1 12 View
5010085 chr13 7 0 0 7 View
5010089 chr13 23 0 0 23 View
5010090 chr13 92 6 11 109 View
5010092 chr13 36 19 27 82 View
5010549 chr13 2 3 0 5 View
5011358 chr13 8 2 2 12 View
5012746 chr13 58 9 11 78 View
5012747 chr13 115 9 1 125 View
5012748 chr13 24 11 0 35 View
5012749 chr13 5 1 0 6 View
5012750 chr13 511 24 30 565 View
5012751 chr13 511 24 31 566 View
5014968 chr13 4 2 2 8 View
5017136 chr13 10 3 4 17 View
5017137 chr13 8 33 2 43 View

Target gene [KLF12] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE40774 Expression array 134 Agilent-026652 Whole Human Genome Microarray 4x44K v2 (Probe Name version)
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE65858 Expression array 270 Illumina HumanHT-12 V4.0 expression beadchip
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE138080 Expression array 35 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE55542 Expression array 36 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip
GSE55550 Expression array 155 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - KLF12 peak across samples

Peak Plot

> Dataset: GSE143026 - KLF12 peak across samples

Peak Plot