EBV Target gene Detail Information

> LINC01416 Gene Search Result


Gene Information
Gene Name LINC01416
Gene ID 101927273
Gene Full Name long intergenic non-protein coding RNA 1416
Gene Alias -
Transcripts ENSG00000260930
Virus EBV
Gene Type ncRNA
HGNC ID HGNC:51645
lncRNASNP2 ID LINC01416
Target gene [LINC01416] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
3000702 chr18 1 2 3 6 View

Target gene [LINC01416] related to Omics data
Data ID Experiment type Sample number Platform
GSE42867 Expression array 12 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
C
  GSE246060 		Chip-seq 26 Illumina NovaSeq 6000 (Homo sapiens)
GSE45919 Expression array 24 Illumina HumanHT-12 V4.0 expression beadchip
GSE100458 Expression array 14 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array [CDF: Brainarray HGU133Plus2_Hs_ENTREZG_v21]
GSE165194 RNA-seq 3 Illumina NextSeq 500 (Homo sapiens)
C
  GSE246059 		ATAC-seq 8 Illumina NextSeq 500 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
GSE177046 RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
GSE12452 Expression array 41 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
GSE85599 Expression array 17 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE58240 Expression array 32 Illumina HumanHT-12 V4.0 expression beadchip
GSE181906 RNA-seq 24 Illumina NovaSeq 6000 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE246060 - LINC01416 peak across samples

Peak Plot

> Dataset: GSE246059 - LINC01416 peak across samples

Peak Plot