Virus Dataset Detail

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Dataset Information
Accession GSE42867
Status 2013/1/22
Title Gene expression changes in subclones of a Burkitt lymphoma cell line with different patterns of EBV latent infection
Organism Homo sapiens
Experiment type Expression profiling by array
Summary In this study we have investigated the gene expression profiles of three different types of subclone all generated by single cell cloning of the same parental EBV positive Burkitt lymphoma cell line Awia-BL. These included EBV negative clones which have lost the virus episome, EBV positive clones with a conventional Latency I form of infection and EBV positive clones with an atypical Wp-restricted form of infection.
Samples
GSM ID Sample info Characteristics Description
GSM1052549 Awia_1g6 rep1 (clone w) cell line:Awia-BL; cell type:Burkitt lymphoma; ebv status:Negative; ebv latency:NA gene expression data from Awia_1g6 rep1 (clone w)
GSM1052550 Awia_1g6 rep2 (clone w') cell line:Awia-BL; cell type:Burkitt lymphoma; ebv status:Negative; ebv latency:NA gene expression data from Awia_1g6 rep2 (clone w')
GSM1052551 Awia_5e10 rep1 (clone z) cell line:Awia-BL; cell type:Burkitt lymphoma; ebv status:Negative; ebv latency:NA gene expression data from Awia_5e10 rep1 (clone z)
GSM1052552 Awia_5e10 rep2 (clone z') cell line:Awia-BL; cell type:Burkitt lymphoma; ebv status:Negative; ebv latency:NA gene expression data from Awia_5e10 rep2 (clone z')
GSM1052553 Awia_9 (clone a) cell line:Awia-BL; cell type:Burkitt lymphoma; ebv status:Positive; ebv latency:Latency I gene expression data from Awia_9 (clone a)
GSM1052554 Awia_15 (clone b) cell line:Awia-BL; cell type:Burkitt lymphoma; ebv status:Positive; ebv latency:Latency I gene expression data from Awia_15 (clone b)
GSM1052555 Awia_33b (clone c) cell line:Awia-BL; cell type:Burkitt lymphoma; ebv status:Positive; ebv latency:Latency I gene expression data from Awia_33b (clone c)
GSM1052556 Awia_20 (clone d) cell line:Awia-BL; cell type:Burkitt lymphoma; ebv status:Positive; ebv latency:Latency I gene expression data from Awia_20 (clone d)
GSM1052557 Awia_1c9 (clone m) cell line:Awia-BL; cell type:Burkitt lymphoma; ebv status:Positive; ebv latency:Wp restricted gene expression data from Awia_1c9 (clone m)
GSM1052558 Awia_1b12 (clone n) cell line:Awia-BL; cell type:Burkitt lymphoma; ebv status:Positive; ebv latency:Wp restricted gene expression data from Awia_1b12 (clone n)
GSM1052559 Awia_1e9 (clone p) cell line:Awia-BL; cell type:Burkitt lymphoma; ebv status:Positive; ebv latency:Wp restricted gene expression data from Awia_1e9 (clone p)
GSM1052560 Awia_1h11 (clone q) cell line:Awia-BL; cell type:Burkitt lymphoma; ebv status:Positive; ebv latency:Wp restricted gene expression data from Awia_1h11 (clone q)
Platform GPL570  : [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
Literature 23269792  
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xCell Plot
* p<0.05 ** p<0.01